BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G11LP1|AL428118
(1161 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1183 101 4e-21
3x_Contig866 101 4e-21
>3x_Contig1183
Length = 3176
Score = 101 bits (47), Expect = 4e-21
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1071 ttttttttttttttttwtttttwttttttgatttttttttttttttttttttttt 1125
|||||||||||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 146 ttttttttttttttttttttttttttttttatttttttttttttttttttttttt 92
Score = 101 bits (47), Expect = 4e-21
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1071 ttttttttttttttttwtttttwttttttgatttttttttttttttttttttttt 1125
|||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 501 tttttttttttttttttttttttttttttgttttttttttttttttttttttttt 447
Score = 101 bits (47), Expect = 4e-21
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 1067 tttattttttttttttttttwtttttwttttttgatttttttttttttttttttttttt 1125
|||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct: 119 tttattttttttttttttttttttttttttttttttttttttttttttttttttttttt 61
Score = 101 bits (47), Expect = 4e-21
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 1067 tttattttttttttttttttwtttttwttttttgatttttttttttttttttttttttt 1125
|||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct: 238 tttattttttttttttttttttttttttttttttttttttttttttttttttttttttt 180
>3x_Contig866
Length = 4028
Score = 101 bits (47), Expect = 4e-21
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 1071 ttttttttttttttttwtttttwttttttgatttttttttttttttttttttttt 1125
|||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 235 tttttttttttttttttttttttttttttgttttttttttttttttttttttttt 181
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.49 0.726 1.39
Gapped
Lambda K H
1.49 0.726 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 78,812
Number of Sequences: 1807
Number of extensions: 78812
Number of successful extensions: 22881
Number of sequences better than 1.0e-20: 2
length of query: 1161
length of database: 10,358,551
effective HSP length: 15
effective length of query: 1146
effective length of database: 10,331,446
effective search space: 11839837116
effective search space used: 11839837116
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 14 (30.0 bits)
S1: 11 (24.0 bits)
S2: 47 (101.2 bits)